Words similar to ecocyc

Example sentences for: ecocyc

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The functional assignments of the E. coli gene products in the November 97 GenBank U00096 deposit represented an accumulation of information retrieved from the literature (collected in the GenProtEC and EcoCyc databases) as well as imputed functions based on similarity of a known protein to the translated sequences [ 1].
Other databases most closely related to ours include EcoCyc, with emphasis on metabolic pathways [ 6], the CGSC database, with information on the genotypes and phenotypes of mutant strains [ 8], and EcoGene, which includes information on gene reconstructions, alternative gene boundaries and verified amino-terminal amino-acid sequences of the mature proteins [ 5].
Several other pathway programs such as KEGG [ 4], EcoCyc/MetaCyc [ 5], Pathway Processor (which uses KEGG) [ 6] and ViMAc [ 7] are available for integration with microarray data analysis, but these programs focus on well-defined metabolic pathways, and like GenMAPP, would benefit from a broader base of pathway information.