Words similar to bdgp
Example sentences for: bdgp
How can you use “bdgp” in a sentence? Here are some example sentences to help you improve your vocabulary:
Sequence retrieval was initiated via BLASTN searches (default parameters- [ 37 ] ) against the BDGP http://www.fruitfly.organd GenBank http://www.ncbi.nlm.nih.govdatabases using LTRs from previously identified Drosophila retroelements as queries [ 15 ] . Results with E-values < e -10were annotated on the corresponding clone, whereupon visual inspection of several annotations confirmed the presence of retroelements proximal to known genes.
Moreover, cDNA sequences designated as full length may actually be truncated; approximately 1,000 of the 9,000 full-insert sequences from the BDGP are probably not full-length [ 29, 30].
Many of these sequence features are already in the FlyBase genetic data tables and gene annotation reports, based on data from literature curation, computational analyses (for example [ 77]), and large-scale projects such as the BDGP Gene Disruption Project.
The evidence datasets used included: gene prediction based on Genie [ 20] and GENSCAN [ 21]; Sim4 alignments to EST and full-insert cDNA sequencing reads derived from the BDGP cDNA project [ 29, 30], the earlier analysis of the Adh region [ 44], and dbEST (for example [ 16]); FlyBase ARGS [ 1]; GenBank/EMBL/DDBJ entries identified as Drosophila cDNA sequences [ 6, 7, 8, 9, 10, 11] and error report submissions to FlyBase [ 1, 2]; and BLASTX protein homology data.
If a specific data adaptor is not provided among the arguments in the initial request, then the DataLoader will bring up a dialog box (org.bdgp.swing.widget.DataAdapterChooser) to allow the user to select an adaptor for an external data source (or sink).
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