Words similar to bagel
Example sentences for: bagel
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Also, whereas the statistical significance of BAGEL results is robust to considerable deviation from general linearity of cDNA microarray results, the quantitative result using SAGE counts as a basis depends critically upon the linearity of cDNA microarray measurements.
Credible intervals determined using BAGEL make it clear that even SER3 , which Sudarsanam et al . examine as a candidate gene differentially affected in the snf2 Δ and swi1 Δ strains on the basis of cDNA microarray and northern data [ 12], should not be inferred to be differentially affected solely on the basis of their cDNA microarray data.
An easy-to-use stand-alone software program entitled BAGEL, which implements this Bayesian analysis of gene expression levels on MacOS or Windows platforms, is available on the web with an online manual [ 48].
One possible effector is the transcriptional regulator Gcr1p, whose BAGEL estimate in ethanol shock is fivefold greater than in normal log growth and whose credible intervals in the two conditions barely overlap (Figure 2).
Output from the BAGEL software is in the form of a tab-delimited text file with one header row.