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Example sentences for: a-c
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When composition is summed across all three codon positions (for example, CGA and GGT would be counted among the eight codons comprised of two G or C and one A or T, with the A/T at the third position), the model is remarkably accurate for both bacteria (Figure 4a-c) and eukaryotes (Figure 4d), though in each case, GC3 shows the greatest deviations from the model (perhaps indicating that the labile GC3 is 'fine tuned' by the other selective pressures linked to codon usage).
The diversity of C3' side chain orientations is illustrated in Figure 2, in which the diterpenoid core A-C rings have been superimposed, and amplified with reference to specific torsions in Table 1. The first five are those with the highest estimated populations (4 to 35%) with a ΔG range of 0.0-1.
Likelihood parameters for the dataset were determined by Modeltest 3.06 for the TrN+G model, and included the following: base frequencies of A = 0.2482, C = 0.207, G = 0.2466, T = 0.2982; r-matrix values of A-C = 1.0000, A-G = 3.1857, A-T = 1.0000, C-G = 1.0000, C-T = 5.1655, G-T = 1.0000; and a gamma distribution of 0.5663.
Dopaminergic neurons were detected by immunostaining for dopamine and dopamine transporter which could be co-localized in nearly 60% neurons (Table 1, Figures 2A-C) as well as dopamine receptors: D1A (50% cells) and D2 (40% cells) (Figures 2E, and 2F).
Therefore as an alternative, we conducted a Bayesian analysis utilizing a GTR model with 6 rate classes (A-C = 1, A-G = 3.19, A-T = 1, C-G = 1, C-T = 5.16, G-T = 1) for 1 × 10 6generations sampled every 10 generations that resulted in a posterior probability distribution containing 1 × 10 5samples.
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