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Example sentences for: ylxr

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The YlxR protein sequence has been assigned to the 'cluster of orthologous groups' (COG) 2740 [ 24], which contains the conserved amino-acid motif GRGA(Y/W) (in the single-letter amino-acid code).
There appear to be two distinct subclades within the YlxR sequence family, both consisting of proteins with unknown or uncertain function (S 1 and S 2 , Figure 2a).
For discovery of additional functional properties, as in the case of a new binding epitope in YlxR or the extensive putative binding site and positively charged epitope in YbaK, JEvTrace provided phylogenetic evidence of clusters of residues on the protein surface.
Several features of the structure of YlxR, including the conserved and appropriately spaced arginines that could form a characteristic positively charged surface patch (colored red in Figure 2b,2c) and a large bent groove reminiscent of other RNA-binding structures, support the argument that YlxR is an RNA-binding protein.
The structure of YlxR is complexed with three sulfate ions, two of which are bound to the arginines R25 and R45, and the third to a lysine pair K62 and K63.