Example sentences for: swissprot

How can you use “swissprot” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • 03202001 "as putative cinnamyl-alcohol dehydrogenase", based on sequence similarity (its top 10 BLAST matches are all cinnamyl-alcohol dehydrogenases with E-values in the range of 10 -94if analyzed against all non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF on Jan 2, 2002).

  • 231 genes were chosen with known disease-association each having SWISSPROT homologs, a cDNA sequence and mutations in the coding region.

  • This pipeline aligns Drosophila ESTs, cDNA sequences, and other sequences in GenBank using sim4 [ 53], performs DNA and protein sequence similarity searches of the GenBank and SwissProt/TrEMBL databases using BLASTX and TBLASTX, and executes the gene-prediction algorithms Genie [ 68] and Genscan [ 69].

  • As a first step to annotation, the translation of all predicted ORFs were used to search the Astral, SwissProt, and non-redundant (NR) databases for sequence similarities using the Smith-Waterman algorithm [ 24].

  • These genes are listed in Table 1. Each alignment consists of all the homologs in SWISSPROT as determined by a BLAST search with an e-value threshold of 10e-15.


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