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Example sentences for: sbhms

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An alignment of the SBHM domains from the DDRP β subunit with the previously identified SBHMs showed conservation of most residues characteristic of the SBHM superfamily (Fig.
Similarly, the β' subunit of proteobacteria, Aquifex , spirochaetes, cyanobacteria and chlamydiae contains an additional set of SBHMs C-terminal of the DPBB domain, preceding the C-terminal SBHM that is shared by all bacteria (Fig.
For example, a PSI-BLAST search initiated with the SBHM from NlpD retrieved the derived SBHMs of the bacterial RNA polymerase subunits (e.g.
In addition to the SBHMs that are conserved among all bacterial lineages, a cassette of up to four SBHMs are present N-terminal of the DPBB domain in the β' subunit of Thermus , Deinococcus and Thermotoga (Fig.
A PSI-BLAST search started with the N-terminal SBHM from the Aquifex aeolicus DDRP β' subunit detected several SBHMs from proteins other than the β' subunit, such as acetylornithine deacetylase (E = 2 × 10 -7, iteration 2), the C-terminal region of bacterial cytochrome F (E = 10 -4, iteration 2), biotin carboxyl carrier domain of biotin transcarboxylases (E = 6 × 10 -4, iteration 2) and the phosphotransferase system enzyme II (E = 10 -3, iteration 2).