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Example sentences for: resampled

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95 [ 41 42 ] [ 43 ] . Trees were constructed from the distance matrices obtained with the above distance estimates using the neighbor-joining method [ 40 ] as implemented in the NEIGHBOR program of the PHYLIP package [ 44 ] . Bootstrap values were estimated by resampling the set of orthologs identified for each pair of genomes 1000 times and reconstructing trees from the distributions of the distances from these resampled sets.
The whole data matrix is resampled, and the clustering is performed again (Figure 8b).
Values of the test statistic from 40 resampled replicates were pooled for calibration purposes.
Unlike the calculation of calibration curves, in which 300-nucleotide subsequences are randomly resampled, hexamer dissimilarity is measured over the whole length of a test sequence when inferring a transcript's origin.
With bootstrapping, (i) the entire data set is resampled with replacement many times, (ii) on each resampling the statistics is computed, and (iii) the statistics from each resampling are combined in a special way [ 22 ] . In a recent study comparing these adjustments with other types of statistics in a different setting, Steyerberg et al [ 22 ] found that the split-sample approach tended to underestimate performance, cross-validation performed poorly on some statistics that were not normally distributed, and bootstrapping performed best overall.