Example sentences for: protonated

How can you use “protonated” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • The pKa of the thiolates clearly plays an important role, as thiolates are more reactive than their protonated counterparts.

  • Protein protonation states were modeled as in the related HIV-1 protease MD simulation study [ 56 ] . All protein residues were modeled in their charged state except for one of the two aspartic acid groups (Asp 25 and Asp 25') in the active site since previous studies [ 57 58 59 ] have shown that at least one of these two aspartic acids is protonated.

  • The protonated ammonium nitrogen is also making polar interaction with the delocalized electron and backbone carbonyl of Trp182, and is less than 1A away from the quaternary nitrogen of docked acetylcholine.

  • The terminal residues of both monomers were also protonated (Pro 1, Pro 1', Phe 99 and Phe 99').

  • We used a protonated Asp 25' and deprotonated Asp 25 for all HIV-1 protease-ligand complexes.


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