Example sentences for: patternfind

How can you use “patternfind” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • Same protein/ORF picked up by BLAST searches using different parameters, or by both BLAST and Patternfind) and compare sequence of protein in this region with other peptide surrogates containing this motif.

  • For Patternfind, the following parameters are used:

  • Motifs and consensus domains can also be used as query patterns to search the protein databases using Patternfind http://www.isrec.isb-sib.ch/software/PATFND_form.html.

  • Database searches using Patternfind at the ISREC server were performed using parameters appropriate for short protein queries and were successful in identifying a human gene product, subunit p170 of eIF3 (Figure 3).

  • , entire surrogate sequence, motifs, etc.), we simultaneously search several public databases using programs such as Blastp, MAST (Motif Alignment and Search Tool) and Patternfind (see Materials and Methods).

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