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Example sentences for: pam

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The PAM clustering procedure of Kaufman and Rousseeuw [ 16], implemented in the cluster package in R and S-Plus, was used to cluster observations based on the Euclidean distance metric (see Background).
The distance matrix was obtained using Protdist with a Dayhoff Pam matrix.
In addition, PAM provides a graphical display, the silhouette plot, which can be used to select the number of clusters and to assess how well individual observations are clustered.
WU-BLASTX (translated nucleotide query versus protein database) parameters were S = 100 M = PAM120 V = 0 W = 4 T = 17.
Pam!