Words similar to pam

Example sentences for: pam

How can you use “pam” in a sentence? Here are some example sentences to help you improve your vocabulary:

The PAM clustering procedure of Kaufman and Rousseeuw [ 16], implemented in the cluster package in R and S-Plus, was used to cluster observations based on the Euclidean distance metric (see Background).
From : Pam Pryor
The DARWIN server [ 30 ] was used to calculate the f2 values for the sequences, as well as a phylogenetic tree for the Shaw sequences, along with PAM distances and ancestral sequences.
Pairwise evolutionary distances between the sequences in concatenated alignments were calculated using the Dayhoff PAM model as implemented in the PROTDIST program of the PHYLIP package [ 44 ] . A distance tree was constructed from the resulting distance matrix by using the least-square [ 46 ] method as implemented in the FITCH program of PHYLIP [ 44 ] . The maximum likelihood tree was constructed with the JTT-F model of amino acid substitutions [ 47 ] , as implemented in the ProtML program of the MOLPHY package [ 48 ] , by optimizing the least squares tree with local rearrangements.
-- Pam Ferguson