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Example sentences for: nemagene

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Sequences were obtained from the Parasitic Nematode Sequencing Project (PNSP) [ 30 ] including clustered Meloidogyne ESTs built with the NemaGene approach [ 28 ] . We analyzed 1,799 M. incognita (WMi) sequences and 3,119 M. javanica (WMj) sequences from these PNSP clusters.
The two datasets share some overlap, with 35% (316/914) of the previously analyzed ESTs finding matches in 16% (261/1,625) of the NemaGene clusters analyzed in this paper, many with strong homology (< 1e-40).
Additional NemaGene versions of M. incognita will be built as additional ESTs become available for the species.
The most extensively studied HGT candidates are four genes encoding β-1,4-endoglucanase, initially identified in the cyst nematodes G. rostochiensis and H. glycines [ 18 19 ] . These four genes (NemaGene Contig IDs MI00537, MI01011, MI01381 and MI01842) [ 30 ] appear to define two sets of paralogs formed before divergence of the cyst and root-knot nematodes.
NemaGene Meloidogyne incognita v 2.0 represents our second complete attempt at generating clusters for this species and is used as the basis for all subsequent analysis in this manuscript.