Words similar to molphy

Example sentences for: molphy

How can you use “molphy” in a sentence? Here are some example sentences to help you improve your vocabulary:

The MOLPHY and Phylip software packages were used for the analyses [ 46 47 ] .
Pairwise evolutionary distances between the sequences in concatenated alignments were calculated using the Dayhoff PAM model as implemented in the PROTDIST program of the PHYLIP package [ 44 ] . A distance tree was constructed from the resulting distance matrix by using the least-square [ 46 ] method as implemented in the FITCH program of PHYLIP [ 44 ] . The maximum likelihood tree was constructed with the JTT-F model of amino acid substitutions [ 47 ] , as implemented in the ProtML program of the MOLPHY package [ 48 ] , by optimizing the least squares tree with local rearrangements.
The MOLPHY and Phylip software packages were used for phylogenetic analyses [ 46 47 ] .
Briefly, this process involved the construction of a least-squares tree using the FITCH program or a neighbor-joining tree using the NEIGHBOR program (both from the Phylip package) [ 38], followed by local rearrangement using the Protml program of the Molphy package [ 37] to arrive at the maximum likelihood (ML) tree.
Briefly, this process involved the construction of a least-squares tree using the FITCH program or a neighbor-joining tree using the NEIGHBOR program (both from the Phylip package) [ 48], followed by local rearrangement using the Protml program of the Molphy package [ 50] to arrive at the maximum-likelihood (ML) tree.