Words similar to modelled
Example sentences for: modelled
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Analyses of small genomes show that about 30-40% of the proteins within the genome can be modelled by comparative modelling and fold recognition methods [ 27 50 52 ] . An additional 20-30% of the sequences are (or contain) small domains with simple secondary structures that are viable candidates for ab initio structure prediction [ 53 ] . The remaining proteins are usually not amenable to structure prediction and sometimes even structure determination (a significant fraction of the latter are membrane proteins).
Overall curvature was determined as the difference between the orientations of the beginning and ending vertebra and is shown in Table 3. (This measurement could have also been modelled with circle detection where the spine represents a segment of the circle.)
Ahab computes an optimal probabilistic segmentation of a sequence S into binding sites and background for a fixed set W of sequence motifs modelled by weight matrices.
Sandals are a tradition in Jerusalem’s Old City, while an Arab keffiyeh head-dress (as modelled by Yasser Arafat) is useful for warding off desert dust and sun.
In the comparative modelling and fold recognition categories, the methodologies rely on the presence of one or more evolutionarily related template protein structures that are used to construct a model; the evolutionary relationship can be deduced from sequence similarity [ 2 3 4 5 ] or by "threading" a sequence against a library of structures and selecting the best match [ 6 7 8 ] . For both of these approaches, a sequence alignment between the target protein to be modelled and the evolutionarily related protein with known structure is used to create the initial or seed model.
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