Words similar to methanobacterium
Example sentences for: methanobacterium
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However, in contrast to sequences present in those Archaea that do possess TrpEb_1 (for example, Archaeoglobus, species of Pyrococcus, Methanococcus, Methanobacterium, Methanosarcina and Halobacterium ), the six archaeal lineages that possess only TrpEb_2 have very distinctive elongated branches on the TrpEa tree (Figure 4).
We selected eight genomes from archaea: Archaeoglobus fulgidus (AF), Aeropyrum pernix K1 (AP), Halobacterium sp. (HS), Methanococcus jannaschii (MJ), Methanobacterium thermoautotrophicum (MT), Pyrococcus abyssi (PA), Pyrococcus horikoshii (PH), and Thermoplasma acidophilum (TA); 14 genomes from bacteria: Aquifex aeolicus (AA), Borrelia burgdorferi (BB), Bacillus subtilis (BS), Chlamydia pneumoniae strain AR39 (CP), Chlamydia trachomatis (CT), E. coli strain K12 (EC), Haemophilus influenzae (HI), Helicobacter pylori strain 26695 (HP), Mycobacterium tuberculosis (MyTu), Mycoplasma genitalium (MG), Mycoplasma pneumoniae (MP), Rickettsia prowazekii (RP), Synechocystis sp. (SS), and Treponema pallidum (TP); four genomes from eukaryotes: Saccharomyces cerevisiae (SC), D. melanogaster (DM), C. elegans (CE), and Arabidopsis thaliana (AT).
In both phylogenies several other Archaea, i.e., M. jannaschii, M. thermolithotrophicus, Thermococcus sp., Halobacterium sp., Methanosarcina and Methanobacterium thermoautotrophicus branch off between the two groups that carry inteins in their ATPase catalytic subunits.
Methanobacterium thermoautotrophicum . In each of these cases, with the species tree used as a reference, the bacteria involved are phylogenetically distant from each other and more so from the archaea, and non-fused versions of the two domains exist within the same bacterial lineages and in archaea (Figure 1).
Data from the following species were assembled into presumptive orthology groups (hereafter, proteins) and aligned [ 36 ] : Aquifex aeolicus , Bacillus subtilis , Borrelia burgdorferi , Chlamydia trachomatis , Escherichia coli , Haemophilus influenzae , Helicobacter pylori, Mycobacterium tuberculosis, Mycoplasma genitalium, Mycoplasma pneumoniae , Rickettsia prowazekii, Synechocystis sp., and Treponema pallidum (Eubacteria), Archaeoglobus fulgidus, Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Pyrococcus abyssi , and P. horikoshii (Archaebacteria: Euryarchaeota), and Arabidopsis thaliana, Caenorhabditis elegans, Dictyostelium discoideum, Drosophila melanogaster, Gallus gallus, Homo sapiens, Mus musculus, Oryza saticva, Plasmodium falciparum, Saccharomyces cerevisiae, Schizosaccharomyces pombe, Trypanosoma sp. , and Xenopus laevis (Eukaryota).
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