Words similar to mas

Example sentences for: mas

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Each GeneChip ®was scanned and analyzed using Affymetrix Microarray Analysis Suite (MAS) version 5.0 [ 11 ] . Each sample was scaled to a target intensity of 1000 using the "all probe sets" scaling option, this option scales the trimmed mean target intensity to the specified value [ 11 ] . The Affymetrix MAS5 expression report provides statistics for each chip that can be used for quality control purposes.
For genes/ESTs with increased levels of expression, defined by MAS 3.0 as marginally increased or increased, wild-type baseline expression levels could be present or absent.
Scaling by the trimmed mean of PM-mismatch (MM), as done by the Affymetrix GeneChip software (MAS 4.0), was observed to separate PM intensity distributions more than is observed for unnormalized data and was not considered in this study.
If all the genes were counted, the spreads of MAS4 and MOID results would be 0.89 and 0.29 for the same data sets.
MAS4 also uses a "super-Olympic scoring" procedure to iteratively filter out outliers, defined as those probe pairs with difference values more than three times the standard deviation away from the mean.