Words similar to lytn
Example sentences for: lytn
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Two major subfamilies within this family, typified respectively by AcmB and S. aureus LytN, are predominantly restricted to the Gram-positive bacteria, and function as cell-wall hydrolases.
We show that this superfamily, in addition to the well characterized P60-related peptidoglycan peptidases, includes divergent cell-wall hydrolases typified by AcmB/LytN, eukaryotic proteins such as LRAT, Egl-26 and their relatives, amidase domains of GSPSs, and several other uncharacterized bacterial proteins.
Transitive searches initiated with the divergent members detected in these searches additionally recovered the amidase domains of bacterial and kinetoplastid GSPS and the bacterial peptidoglycan-degrading enzymes such as Lactococcus AcmB, Staphylococcus LytA [ 33] and LytN [ 34] and their homologs.
Reciprocal searches initiated with regions from the newly detected proteins YaeF, LRAT and LytN detected their closely related homologs in the initial iterations, but in subsequent iterations they recovered several classic N1pC/P60 homolog members with significant E-values (E < 0.01),
A search with the N1pC of E. coli (gi: 15802120, residues 35-154) recovered several P60 homologs in its first iteration, YaeF of E. coli (second iteration, E = 3 × 10 -4), the Arabidopsis homolog of LRAT, At5g16360 (gi: 15237330, second iteration, E = 5 × 10 -4) and LytN of Staphylococcus aureus (gi: 3767593, fourth iteration, 8 × 10 -6).