Words similar to kegg
Example sentences for: kegg
How can you use “kegg” in a sentence? Here are some example sentences to help you improve your vocabulary:
Functional classification based on KEGG analysis
We present here an analysis of 5,713 ESTs from M. incognita L2 including creation of NemaGene clusters to reduce sequence redundancy, identification of abundant transcripts, and functional classification of gene products based on assignments to InterPro domains, the Gene Ontology hierarchy, and KEGG biochemical pathways.
The chart shows that a KEGG pathway of apoptosis includes five genes induced by HIV-1 gp120.
EC numbers were assigned to 258 clusters (16% of total), of which 176 (11%) had mappings to KEGG biochemical pathways (361 total and 212 unique mappings).
As an alternative means of assigning function to clusters, clusters were also assigned to metabolic pathways using KEGG [ 102 103 ] . Assignments were made by requiring that the highest-scoring BLAST match in SWIR v.21 have an assigned enzyme commission (EC) number [ 104 ] . EC number mappings to KEGG pathways were then used to putatively assign clusters into biochemical pathways.
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