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Example sentences for: icmb
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The first major category, Comparative Structure Models http://www.rna.icmb.utexas.edu/CSI/2STR/contains our most recent 16S and 23S rRNA covariation-based structure models, which were adapted from the original Noller & Woese models (16S [ 15 22 ] and 23S [ 19 ] rRNA), and the structure models for 5S rRNA [ 12 ] , tRNA [ 5 6 7 8 9 ] , and the group I [ 32 ] and group II [ 34 ] introns, as determined by others.
The relational database management system (RDBMS) available from the Comparative RNA Web Site http://www.rna.icmb.utexas.edudescribed in this work utilizes the MySQL engine http://www.mysql.com/.
This collection of RNA structure models was predicted with covariation analysis, as described at the CRW Site Methods Section http://www.rna.icmb.utexas.edu/METHODS/and in several publications (see below).
Each RNA structure model presented here is based upon a single reference sequence, chosen as the most representative for that molecule (Table 1); for example, E. coli is the preferred choice as the reference sequence for rRNA (5S, 16S, and 23S), based on the early and continued research on the structure and functions of the ribosome [ 77 78 ] . Each of the six structure models (5S, 16S and 23S rRNA, group I and II introns, and tRNA) in the "Current Structure Models for Reference Organisms" page http://www.rna.icmb.utexas.edu/CSI/2STR/contains six or seven different diagrams for that molecule: Nucleotide, Tentative, Helix Numbering, Schematic, Histogram, Circular, and Matrix of All Possible Helices.
The Comparative RNA Web Site http://www.rna.icmb.utexas.eduis hosted on a Sun Microsystems Enterprise 250 dual-processor server.
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