Words similar to hypergeometric
Example sentences for: hypergeometric
How can you use “hypergeometric” in a sentence? Here are some example sentences to help you improve your vocabulary:
We first used the hypergeometric distribution to calculate the probability of observing each GO term as enriched in each group, on the basis of the number of genes in the group, the number of genes in that group that are annotated with that GO term, and the number of genes in the genome that are annotated with that GO term.
The summation in prob p (i) computes the cumulative hypergeometric probability of pathway p containing c p (i) or more members of C i . prob p (i) assesses co-clustering of pathway members in the single cluster C i . sumprob(p), the sum of prob p (i) values over all clusters for which c p (i) >= 2, is a simple measure of co-clustering across the entire collection of available clusters.
Of the nineteen proteins we have included in our depiction of the pheromone response network, eighteen are annotated as playing a role in the fungal cell differentiation by MIPS [ 10 ] . The probability that this selection would have occurred by chance was calculated with the hypergeometric distribution was found to be P = 5 × 10 -24.
Genes were assigned to each cluster using an empirically chosen membership cutoff of 0.06 or 0.08, and the probability of observing the number of genes in each cluster that contained one or more copies of each transcription factor binding site was calculated, based on the hypergeometric distribution (see Materials and methods).
To identify novel enriched promoter sequences, we calculated the hypergeometric distribution of all possible 6-mer sequences in the promoters of the genes clustered by fuzzy k-means clustering.
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