Words similar to hapla
Example sentences for: hapla
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2), and included all of the sequences shown in Figure 2except for the incomplete sequences from a spider ( C. salei run-2 ) and from the root-knot nematode ( M. hapla ). The consensus topology produced by each method was largely consistent with accepted phylogenies for all nodes with significant bootstrap values (Fig.
The literature reports seven genes postulated to have been horizontally acquired by M. incognita, M. hapla or M. javanica during evolution of plant-parasitic nematodes [ 17 18 19 20 21 ] ; our search algorithm revealed six of these genes.
Meloidogyne sequences from NCBI dbEST ( M. incognita , M. javanica and M. hapla sequences, named NMi, NMj, and NMh respectively) were translated in six frames and individually compared to conceptual six-phase translations of the C. elegans and Drosophila genomes as well as all available bacterial sequences.
MI00244.cl, for example, had homology to 47 ESTs in our collection from other Tylenchida species including root-knot nematodes M. javanica, M. hapla and M. arenaria , cyst nematodes H. glycines and G. rostochiensis , and the lesion nematode Pratylenchus penetrans with E-values from 7e-78 to 3e-05.
Included are 32,735 sequences from Meloidogyne species ( M. incognita 12,752, M. hapla 11,049, M. javanica 5,600, M. arenaria 3,334), as well as ESTs from cyst nematode species ( G. rostochiensis 5,934, H. glycines 4,327, G. pallida 1,832), and the lesion nematode ( P. penetrans 2,048).