Words similar to encode
Example sentences for: encode
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Sequence analysis of the TK coding region from all five plaque isolates identified a G nucleotide insertion in the homopolymeric hot-spot G7 tract at nucleotide 435, a common mutation present in other ACV rHSV isolates [ 18 19 ] . This base insertion produced a frame shift in the coding sequence, resulting in a loss of the ATP / nucleoside-binding site and the creation of a premature stop codon at amino acid 228 to encode a truncated 28 kD TK polypeptide.
For over a decade the idea of representing biological sequences in a continuous coordinate space has maintained its appeal but not been fully realized [ 1 2 3 ] . The basic idea is that sequences of symbols, such as nucleotides in genomes, aminoacids in proteomes, repeated sequences in MLST [Multi Locus Sequence Typing, 4], words in languages or letters in words, would define trajectories in this continuous space conserving the statistical properties of the original sequences [ 3 5 6 7 8 9 ] . Accordingly, the coordinate position of each unit would uniquely encode for both its identity and its context, i.e. the identity of its neighbors [ 10 ] . Ideally, the position should be scale-independent, such that the extraction of the encompassing sequence can be performed with any resolution, leading to an oligomer of arbitrary length.
The distribution for pseudogenes is similar to that for protein families and folds ( b = 1.8); this is expected, as pseudogenes in the worm represent a population of DNA sequences that used to encode functional proteins.
Among the genes that are important in notochord development are those that encode laminins.
This suggests that, unlike bacteria and eukaryotes, in which the superfamily is widely represented, archaea do not encode bona fide members.