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Example sentences for: e-values
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The following files are available with the online version of this article: the e-values of the best matches for the initial BLASTX searches against bacteria, C. elegans and Drosophila for the WMi dataset (Additional data file 1), together with a mapping file (Additional data file 2) that gives the MI contig number associated with each filename; the best match and e-value for the BLASTX search of the WMj dataset against bacteria (Additional data file 3), C. elegans (Additional data file 4) and Drosophila (Additional data file 5); the e-value for the best match to bacteria, C. elegans and Drosophila resulting from a TBLASTX search for the NMi dataset (Additional data file 6), the NMj dataset (Additional data file 7), the NMh dataset (Additional data file 8), where a value of 100 indicates no match found; a text file with details of the data given in each of these dataset files (Additional data file 9); the alignment in Phylip format used to calculate the NodL tree (Additional data file 10); the alignment in Phylip format of the original sequences, before any manual adjustments were made (Additional data file 11); and a key giving the gi number listed in the alignment for each species (Additional data file 12).
The e-values of the best matches for the initial BLASTX searches against bacteria, C. elegans and Drosophila for the WMi dataset
If there were not 15 matches with an e-value meeting this criterion, all sequences with e-values lower than 1.0e -10were selected.
Reciprocal searches initiated with the E. coli YgiF protein (residues 1-200), not only recovered its bacterial orthologs, archaeal CyaB homologs and eukaryotic proteins, but also several others such as Bacillus subtilis YjbK, Methanosarcina Ma2350, and Mesorhizobium loti Mll4592 with e-values in the range of 10 -4-10 -6upon first detection.
While the e-values for the Arabidopsis ORFs were between 2e-56 and 1e-16, the best e-value for a non-plant sequence was 0.003 for an unknown human open reading frame.
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