Words similar to deinococcus
Example sentences for: deinococcus
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Sequence searches initiated with the conserved globular region of the eukaryotic RAD52 proteins readily detected their homologs from other eukaryotes and, at convergence, also retrieved from the database certain bacterial proteins, such as DR0423 from Deinococcus and CAC1936 from Clostridium respectively, with border-like statistical significance (e ~ .05).
This protein and its orthologs (direct evolutionary counterparts related by vertical descent from a common ancestor) from the bacteria Thermotoga maritima and Deinococcus radiodurans were identified as 'distant orthologs' of the Bacillus subtilis CysRS by using a computational method specifically designed to detect distantly related orthologs [ 18].
This search (expect value (e) threshold for inclusion in profile = 0.01) recovered, in addition to the orthologs of the PRC-H proteins from other purple proteobacteria, several uncharacterized proteins from the cyanobacterium Anabaena (for example, all5315 and alr5332, iteration 2, e = 10 -6-10 -4), non-photosynthetic α-proteobacteria such as Mesorhizobium, Sinorhizobium, Brucella and Caulobacter (for example, SMc00885, iteration 4, e = 10 -4or CAC1676, iteration 5, e = 10 -6), several other assorted bacteria like Deinococcus, Bacillus and Streptomyces (for example, YlmC iteration 4, e = 10 -5) and several archaea with completely sequenced genomes.
In addition to the purple bacteria, such versions are seen in the cyanobacteria, α-proteobacteria such as rhizobia, Agrobacterium tumefaciens and Brucella melitensis, and Deinococcus radiodurans (Figure 3).
Interestingly, in addition to these proteins, this search also recovered the ribosome-associated RimM protein from bacteria (for example, RimM, Deinococcus radiodurans, iteration 6, e = 10 -4).
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