Words similar to deinococcus
Example sentences for: deinococcus
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Sequence searches initiated with the conserved globular region of the eukaryotic RAD52 proteins readily detected their homologs from other eukaryotes and, at convergence, also retrieved from the database certain bacterial proteins, such as DR0423 from Deinococcus and CAC1936 from Clostridium respectively, with border-like statistical significance (e ~ .05).
This aroQ•aroA fusion also occurs in Staphylococcus and in Deinococcus.
The major bacterial lineages are poorly resolved in rRNA-based trees [ 2 29 ] and those built using alignments of RNA polymerase subunits [ 30 ] and translation elongation factors [ 29 31 ] . In the currently accepted taxonomy, which is based primarily (but not exclusively) on 16S RNA phylogenetic analysis, bacterial lineages that are suggested by this analysis to form higher-level clusters, tend to form primary nodes under Bacteria (Chlamydiales, Spirochetales, Cyanobacteria, the Thermus-Deinococcus group, Aquificales, Thermotogales).
Interestingly, in addition to these proteins, this search also recovered the ribosome-associated RimM protein from bacteria (for example, RimM, Deinococcus radiodurans, iteration 6, e = 10 -4).
Maximum-likelihood trees were constructed for each of these COGs, and a breakdown of nearest neighbors was derived for species and groups involved in each of the non-trivial or questionable branchings discussed above ( Crenarchaea, Thermotoga, Aquifex, Deinococcus, Mycobacterium, Synechocystis, spirochetes, chlamydia, and ε-proteobacteria).
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