Words similar to caulobacter
Example sentences for: caulobacter
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This search (expect value (e) threshold for inclusion in profile = 0.01) recovered, in addition to the orthologs of the PRC-H proteins from other purple proteobacteria, several uncharacterized proteins from the cyanobacterium Anabaena (for example, all5315 and alr5332, iteration 2, e = 10 -6-10 -4), non-photosynthetic α-proteobacteria such as Mesorhizobium, Sinorhizobium, Brucella and Caulobacter (for example, SMc00885, iteration 4, e = 10 -4or CAC1676, iteration 5, e = 10 -6), several other assorted bacteria like Deinococcus, Bacillus and Streptomyces (for example, YlmC iteration 4, e = 10 -5) and several archaea with completely sequenced genomes.
The sequences of the proteins encoded in complete genomes were extracted from the Genome division of the Entrez retrieval system [ 34 ] . The analyzed genomes included those of 30 bacteria: Aquifex aeolicus (Aquae), Bacillus halodurans (Bacha), Bacillus subtilis (Bacsu), Borrelia burgdorferi (Borbu), Buchnera sp. (Bucsp), Campylobacter jejunii (Camje), Caulobacter crescentus (Caucr), Chlamydia trachomatis (Chltr), Chlamydophila pneumoniae (Chlpn), Deinococcus radiodurans (Deira), Escherichia coli (Escco), Haemophilus influenzae (Haein), Helicobacter pylori (Helpy), Lactococcus lactis (Lacla), Mesorhizobium loti (Meslo), Mycoplasma genitalium (Mycge), Mycoplasma pneumoniae (Mycpn), Mycobacterium tuberculosis (Myctu),
Caulobacter
Rv2235 also contains the SURF-1 signature sequence [ 26 ] and modest homology to members of the SURF-1 family such as the SURF-1 protein of Caulobacter crescentus (25% identity; 40% similarity) [ 27 ] . SURF-1 proteins are ~33-kDa, integral membrane proteins whose precise function is not known.
The number of QuartOPs identified per genome quartet ranges from 82 (for genome quartet #6: Deinococcus radiodurans, Treponema pallidum, Escherichia coli, and Halobacterium sp .) to 1182 (for genome quartet #63: Agrobacterium tumifaciens, Sinorhizobium meliloti, Mezorhizobium loti and Caulobacter crescentus ).