Words similar to campylobacter
Example sentences for: campylobacter
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Campylobacter
The sequences of the proteins encoded in complete genomes were extracted from the Genome division of the Entrez retrieval system [ 34 ] . The analyzed genomes included those of 30 bacteria: Aquifex aeolicus (Aquae), Bacillus halodurans (Bacha), Bacillus subtilis (Bacsu), Borrelia burgdorferi (Borbu), Buchnera sp. (Bucsp), Campylobacter jejunii (Camje), Caulobacter crescentus (Caucr), Chlamydia trachomatis (Chltr), Chlamydophila pneumoniae (Chlpn), Deinococcus radiodurans (Deira), Escherichia coli (Escco), Haemophilus influenzae (Haein), Helicobacter pylori (Helpy), Lactococcus lactis (Lacla), Mesorhizobium loti (Meslo), Mycoplasma genitalium (Mycge), Mycoplasma pneumoniae (Mycpn), Mycobacterium tuberculosis (Myctu),
For this purpose, we used five closely related genomes in the enterobacteria group: E. coli O157:H7 EDL933 [ 11 ] , E. coli O157:H7 Sakaï [ 29 ] , E. coli K12 [ 30 ] , Salmonella enterica [ 31 ] , and S. typhimurium LT2 [ 10 ] ; three closely related genomes in the alpha-proteobacteria group: Helicobacter pylori J99 [ 32 ] , H. pylori 26695 [ 33 ] , and Campylobacter jejunii [ 34 ] ; and three closely related genomes in the Streptococcus genus: S. pneumoniae R6 [ 35 ] , S. pneumoniae TIGR4 [ 36 ] , and S. pyogenes [ 12 ] . We considered as unambiguous the relationships between these bacteria because, for example, the orthologous genes of the two strains of E. coli O157:H7 are almost identical at the nucleotide level, while they show noticeable differences from E. coli K12 (data not shown).
Bacteria: Aae, Aquifex aeolicus; Bap, Buchnera aphidicola; Bbu, Borrelia burgdorferi; Bsu, Bacillus subtilis; Bhal, Bacillus halodurans; Cje, Campylobacter jejuni; Cpn, Chlamydophila pneumoniae; Ctr, Chlamydia trachomatis; Dra, Deinococcus radiodurans; Eco, Escherichia coli; Hin, Haemophilus influenzae; Hpy, Helicobacter pylori; Mge, Mycoplasma genitalium; Mpn, Mycoplasma pneumoniae; Mtu, Mycobacterium tuberculosis; Nme, Neisseria meningitidis; Pae, Pseudomonas aeruginosa; Rpr, Rickettsia prowazekii; Syn, Synechocystis sp.; Tma, Thermotoga maritima; Tpa, Treponema pallidum; Vch, Vibrio cholerae; Xfa, Xylella fastidiosa . Eukaryote: Sce, Saccharomyces cerevisiae . Archaea: Ape, Aeropyrum pernix; Afu, Archaeoglobus fulgidus; Hbs, Halobacterium sp.; Mja, Methanococcus jannaschii; Mth, Methanobacterium thermoautotrophicum; Pho, Pyrococcus horikoshii; Pab, Pyrococcus abyssi; Tac, Thermoplasma acidophilum .
The presence, in both trees, of two distinct clusters of fusion components and the isolated fusion in Campylobacter jejuni suggest at least three independent fusion events, two of which apparently were followed by horizontal dissemination of the fused gene (Figure 4a,4b).
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