Words similar to apses
Example sentences for: apses
How can you use “apses” in a sentence? Here are some example sentences to help you improve your vocabulary:
For example, a search initiated with the KilA-N domain of Pseudomonas phage D3 Orf11 (gi:9635595) recovered the APSES domain of Saccharomyces MBP1p with an E-value of 0.05 in iteration 3. Reciprocal searches with the profiles of APSES domains, similarly recovered the KilA-N domain with borderline E-values.
The phyletic patterns of the KilA-N and APSES domains have interesting implications for the origin of the fungal transcription factors.
Both 3DPSSM and PSIPRED gave hits (E-value approximately 0.05 for 3DPSSM and probability of matching approximately 0.8 for PSIPRED) that implied a 90% certainty of the KilA-N domain adopting the same fold as the APSES domain (PDB 1bm8/1bm1).
This appears less likely, however, because the APSES domains show limited sequence diversity in the fungi, compared with the much greater sequence diversity of the KilA-N domain in a wide range of DNA viruses that had probably already diverged by the time fungi emerged (Figure 1a).
The sequence-structure threading with the 3D-PSSM method recovered the APSES domain structure (PDB 1bm8/1bm1) as the best hit for the Bro-N domain, albeit with statistically insignificant E-values.