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Example sentences for: ybak

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The three subclades are YbaK (S 2 in Figure 3a), an insertion domain in the acceptor stem of prokaryotic prolyl-tRNA synthetases (S
JEvTrace analysis suggests that YbaK is involved in a protein-protein interaction requiring a binding site with hydrophobic and polar patches, and an oxyanion hole opposite a conserved lysine.
Thus although, the YbaK family subtypes only share one conserved amino-acid across species, the patterns of subclade sequence conservation suggest a main binding function, characterized by unique specificity within multiple clades that is spatially centered around the conserved lysine, K46.
The YbaK family is composed of three large subclades, related by an absolutely conserved lysine, K46.
The face opposite this binding site presents a patch of positively charged residues, supporting the hypothesis of a nucleotide binding function for at least some subclades of the YbaK family.