Words similar to wormpep

Example sentences for: wormpep

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To identify cases where M. incognita and C. elegans share homologous genes which have been surveyed in C. elegans for knockout phenotype using RNAi, a list of all 7,212 available C. elegans RNAi experiments (5 May 2002) from WormBase [ 56 ] was compared to the list of all M. incognita clusters with significant homology matches to the C. elegans Wormpep v.54 protein database.
03202001 and wormpep 43 against Pfam 6.6.
03202001, a flatfile database of 25,579 A. thaliana amino acid sequences (hypothetical, predicted and experimentally verified) that have been identified as part of the Arabidopsis Genome Initiative (AGI) http://www.arabidopsis.org/info/agi.html, and wormpep 43, a flatfile database of 19,730 C. elegans amino acid sequences http://www.sanger.ac.uk/Projects/C_elegans/wormpep/.
.2421700) matched regions of the genome where genes were predicted in later versions of Wormpep (WP 88, WP 73 and WP 65, respectively) indicating the usefulness of ESTs from other nematodes in predicting C. elegans coding regions.
In fact, ESTs from our parasitic nematode sequencing project are being continually mapped to the C. elegans genome [ 56 ] and used by Wormpep curators for this purpose.