Words similar to unrooted

Example sentences for: unrooted

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For all three possible unrooted tree topologies maximum-likelihood values and posterior probabilities were calculated using in-house JAVA programs that were written utilizing classes from the Phylogenetic Analysis Library version 1.0 [ 54 ] and parts of Vanilla package version 1.0 [ 54 ] . If not indicated otherwise, likelihood values were estimated using the automatically selected suitable substitution model (chosen from BLOSUM62, CPREV, Dayhoff, JTT, MTREV24, VT and WAG) with no ASRV.
The concept of speciation and duplication is only meaningful on rooted gene trees, but the neighbor joining algorithm infers unrooted trees.
Figure 7presents an unrooted radial tree that shows the chlamydial proteins to comprise a distinct cluster.
Figure 8shows an unrooted tree of SstT proteins.
The alignment of Runt domain amino acid sequences was used to construct unrooted trees by several complementary approaches (neighbour-joining, maximum-likelihood, and maximum-parsimony, described in Methods).