Words similar to tylenchida
Example sentences for: tylenchida
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The finding of multiple Tylenchida genes with close homologs in rhizobacteria suggests the possibility of horizontal transfer of cassettes of genes or multiple transfer events between nitrogen-fixing soil bacteria and plant parasitic nematodes.
Following clustering, comparative analyses were performed using WU-BLASTX and WU-TBLASTX [ 92 93 ] with 1,798 contig consensus sequences (themselves grouped into 1,625 cluster groups) as queries versus multiple databases including SWIR v.21 (5/19/2000) non-redundant protein database and Wormpep v.54 C. elegans protein database (Wellcome Trust Sanger Institute, unpublished work), C. elegans mitochondrial protein sequences, and six internally constructed databases using intersections of data from the GenBank nucleotide database and dbEST [ 96 ] . These include: nemnoele (all nucleotide data from the phylum Nematoda with C. elegans removed); nemnoelenomi (nemnoele with M. incognita removed); nemnoelenomel (nemnoele with all Meloidogyne species removed); nemnoelenotyl (nemnoele with all Tylenchida species removed); yestylnomel (all Tylenchida species except Meloidogyne ); mj (only M. javanica sequences).
MI00244.cl, for example, had homology to 47 ESTs in our collection from other Tylenchida species including root-knot nematodes M. javanica, M. hapla and M. arenaria , cyst nematodes H. glycines and G. rostochiensis , and the lesion nematode Pratylenchus penetrans with E-values from 7e-78 to 3e-05.
In 1998, it was discovered that plant parasitic nematodes possess genes encoding beta-1,4-endoglucanase enzymes (cellulases) and that by far the strongest non- Tylenchida homologs for these enzymes were prokaryotic cellulases from Pseudomonas, Clostridium and other microbes.
Twenty of these clusters showed conservation only to gene products from other Tylenchida species.
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