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Example sentences for: tramtrack

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KRC and tramtrack (TTK) share the same class of C 2 H 2 zinc finger pairs.
TTK: tramtrack
After cloning and DNA sequencing, the KRC-selected sequence datasets were analyzed by the computer program Multiple Expectation Maximum for Motif Elicitation (MEME version 3.0) to generate sets of position specific scoring matrices (PSSMs) or motifs [ 30 ] . When the program was set to identify wider sequences (= 9 nucleotides) the PSSMs were homologous to Sb [ 29 ] , the κB motif [ 31 ] , and the canonical heptamer and nonamer elements of the RSS [ 32 ] . However, shortening the width of the motifs to 5 nucleotides, the target length for the C 2 H 2 zinc finger pairs of the tramtrack [ 33 ] , the ZAS-N dataset yielded two motifs, "GGTAT" and "T(T/C)TT(T/G)G" and the ZAS-C dataset yielded a single motif, "TGTGG".
aa, amino acid; BTB: Broad-Complex, Tramtrack and Bric-a-brac; GST, glutathione-S-transferase; NLS, nuclear localization signal; ORF, open reading frame; RT-PCR, reverse transcription - polymerase chain reaction; TOP1, DNA topoisomerase I.
The ZAS proteins (with two zinc finger pairs), tramtrack (with one finger pair), and basonuclin (with three finger pairs), constitute a unique class of C 2 H 2 zinc finger transcription factors.