Words similar to threading

Example sentences for: threading

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In the comparative modelling and fold recognition categories, the methodologies rely on the presence of one or more evolutionarily related template protein structures that are used to construct a model; the evolutionary relationship can be deduced from sequence similarity [ 2 3 4 5 ] or by "threading" a sequence against a library of structures and selecting the best match [ 6 7 8 ] . For both of these approaches, a sequence alignment between the target protein to be modelled and the evolutionarily related protein with known structure is used to create the initial or seed model.
To get your bearings, picture Paris as a circle, with the river Seine threading across the center, flanked by famous landmarks — Notre-Dame, the Louvre, place de la Concorde, Arc de Triomphe, the Tour Eiffel.
The highlight of CASP1 was the recognition of threading as viable method for predicting folds [ 15 ] , and the success of neural-network based secondary structure prediction methods [ 16 ] .
Thus, given that the Bro-N domain is a DNA-binding domain, it appears plausible that it adopts a fold similar to that of the KilA-N domain, although sequence analysis and threading methods failed to provide strong support for this.
To gain a better understanding of the functions and evolution of these regulatory proteins, we initiated a detailed analysis of their sequences using position-specific-score matrix searches, sequence-structure threading, secondary-structure prediction and structure comparisons.