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Example sentences for: taxonomyhome
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The second presentation mode maps the same nucleotide frequency data in the previous section onto the NCBI phylogenetic tree http://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html/ [ 60 61 ] (see Materials and Methods for details).
This interface is based on the Taxonomy Browser developed by NCBI http://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html/and uses the NCBI taxonomy database [ 60 61 ] . Here, we describe the PhyloBrowser interface, ways to navigate through the phylogenetic data, and how to retrieve RNA information using this system.
This computer system organizes all of our RNA sequence and structure entries, associates them with the organisms' complete NCBI phylogeny http://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html/, and allows for the efficient retrieval of this data (see Section 4: Data Access Systems for more details).
This tree is based mainly on information from Maddison's "Tree of Life" project http://tolweb.org/tree/phylogeny.html, NCBI's taxonomy database http://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html, the "Deep Green" project http://ucjeps.berkeley.edu/bryolab/greenplantpage.html, and [ 29 30 31 32 ] . This master tree groups nematodes and arthropods into a clade of ecdysozoans (molting animals) as proposed by Aguinaldo [ 29 ] , a classification which is still controversial.
Each diagram contains the full NCBI phylogenetic classification http://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html/for the group.