Words similar to tair

Example sentences for: tair

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The secondary structures of the proteins, α-helical, and coiled-coil regions were analyzed using DNASTAR PROTEAN software and the coiled-coil regions were confirmed with the MultiCoil algorithm [ 2 ] . Coiled-coil proteins from Arabidopsis were identified by searching the lists of complete-genome ORF annotations ftp://ftp.arabidopsis.org/home/tair/Genes/ORF_annotationsfor the keywords "myosin" (40 hits) and "coiled-coil" (0 hits).
Using the amino-acid sequence of the conserved motor domain of the plant myosin MYA1 [ 41], databases were searched using BLASTP and TBLASTN at TAIR [ 11].
To determine whether a particular motif is over-represented among the promoters of a given SSH library, we first determined the frequency of each motif in the total complement of Arabidopsis promoters using the 1,000 bp upstream promoter files from TAIR [ 103 ] . We then calculated the probability of finding m promoter regions having one or more motifs in the set of n promoters in each SSH library, as well as in the total SSH library collection.
Using the conserved motor domain of the plant myosin At MYA1 [ 41] database searches were performed using BLASTP and TBLASTN at TAIR [ 11].
Arabidopsis genome data were accessed through the TAIR database http://www.arabidopsis.org/.