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Example sentences for: tair

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The sequences from TAIR were also compared to the proteins containing kinesin-like motor domains as listed at MIPS ( http://www.mips.biochem.mpg.de/proj/thal/db/index.html).
We then used BLAST at the TAIR site to search the AGI genome database and identified the MIPS code for the differentially expressed genes reported in each of these studies.
Arabidopsis genome database searches were performed with BLASTN software in TAIR [ 18].
Location of the genes on the chromosome was identified using the Arabidopsis Sequence Map Overview of TAIR ( http://www.arabidopsis.org/cgi-bin/maps/Schrom).
To determine whether a particular motif is over-represented among the promoters of a given SSH library, we first determined the frequency of each motif in the total complement of Arabidopsis promoters using the 1,000 bp upstream promoter files from TAIR [ 103 ] . We then calculated the probability of finding m promoter regions having one or more motifs in the set of n promoters in each SSH library, as well as in the total SSH library collection.