Words similar to synonymous

Example sentences for: synonymous

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Using a codon-based alignment of the NA sequences in the high homology group, we analyzed the occurrence of synonymous and nonsynonymous substitutions over the entire coding region.
Selection was measured in terms of the ratio of the rate of nonsynonymous substitutions (K n ), which are usually subject to selective pressure, to the rate of synonymous substitutions (K s ), which are assumed to be (nearly) neutral.
Weak selection acting on synonymous sites or differences in mutation bias among related species might potentially result in homogeneity of codon usage in genes within one genome, which would translate into a much greater heterogeneity of codon vocabulary in orthologous genes compared to paralogous genes.
From this analysis, we estimated the rates of total synonymous and non-synonymous substitutions for 200 fragments that were aligned in-frame and then analyzed with the program NAGV2 [ 26 ] using the methods of Nei and Gojobori [ 27 ] . The results of these analyses show that the average nucleotide diversity between the two species is 2.59% ± 0.06% (range 0% to 18.
The data was analyzed using the DNAStar (Madison, WI) package and Artemis [ 15 ] . Rates of synonymous and non-synonymous substitution were calculated by the un-weighted method of Nei and Gojobori [ 27 ] . Pustell DNA matrix analysis [ 25 ] was performed using MacVector version 7.1 software.