Example sentences for: sptrreal

How can you use “sptrreal” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • SPTRREAL is composed of 3,687 D. melanogaster sequences from the SWISS-PROT and TrEMBL protein databases [ 31] and provides a curated protein-sequence database with a high level of annotation, a minimal level of redundancy and the absence of any hypothetical or computational gene models.

  • In Release 3, about 75% of all genes with a cognate in SPTRreal are in the Perfect match and Single AA substitution categories (2,764 out of 3,687).

  • In some cases, annotation errors were detected and gene models were modified to produce a translation matching the SPTRreal sequence.

  • For the first two categories, the SPTRreal peptide was allowed to match a portion of the annotated peptide if it was designated as a 'fragment' of the full peptide sequence (125 or 3.4% of SPTRreal genes are designated with this tag).

  • ClustalW [ 34] and showalign [ 35] are used to generate a multiple alignment from the annotated peptides for the gene and the corresponding SPTRREAL peptide or peptides.


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