Words similar to rotamer

Example sentences for: rotamer

How can you use “rotamer” in a sentence? Here are some example sentences to help you improve your vocabulary:

The backbone conformation is captured in the Ramachandran angles φ, ψ [ 1 ] . The rotamer degrees of freedom fixes the entire side chain.
Multiple side chain conformations for residue positions that differ in type between the template and target proteins were generated by exploring all the possibilities in a rotamer library [ 31 ] . The most probable conformations based on the interactions of a given conformation with the local main chain were selected using an all-atom distance dependent conditional probability discriminatory function [ 32 ] .
Side chain conformations are predicted by simply using the most frequently observed rotamer in a database of protein structures [ 30 ] . New conformations are generated by perturbing the existing conformation at an arbitrary residue by one of two methods: ( i ) the torsion values for three residues with identical sequence from a known structure are used to modify the current conformation, similar in spirit to that of Baker and colleagues [ 39 ] ; ( ii ) one of possible 14 torsion (φ/ψ) values derived based on the most frequently occurring torsion values for a given residue in a database of known structures.
Rotamer 4 corresponds to the recently proposed bioactive conformation of Taxol bound to β-tubulin.