Words similar to quartop

Example sentences for: quartop

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To facilitate comparison of Bayesian posterior probabilities with a more widely used confidence measure, we generated 100 bootstrapped samples [ 32 ] from each QuartOP in case #8.
The maximum-likelihood mapping approach was further used to visualize support for each tree topology [ 24 ] , i.e. the posterior probability vector for each QuartOP was plotted into an equilateral triangle.
Each of the bootstrapped samples supports one of the three possible topologies, thus the sum of the bootstrap support values for the three topologies adds up to 100%, and the percentage of bootstrapped samples for each QuartOP that best supported each tree was again plotted in a barycentric coordinate system (Fig.
Posterior probabilities were also calculated with MrBayes version 2.01 [ 31 ] . Each QuartOP was analyzed with two simultaneous Markov chains for 25,000 cycles under the JTT substitution model [ 55 ] without ASRV.
The amino acid sequences for each QuartOP were retrieved from GenBank at NCBI and were aligned using ClustalW 1.8 [ 53 ] . QuartOPs were analyzed using the ML-mapping approach according to Strimmer and von Haeseler, Bayesian probabilities mapping and bootstrap support values mapping techniques (see details below).