Words similar to quartop
Example sentences for: quartop
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Every QuartOP was compared to the COG database using the blastp program.
While pairwise sequence identity is not a universally dependable measure of phylogenetic information content, these values illustrates that the sequences within a QuartOP are neither identical to one another, nor so divergent as to be saturated with substitutions and of questionable homology [ 30 ] . Using only the most conserved QuartOPs does not change the qualitative result: each of the three possible tree topologies is supported by about an equal number of QuartOPs (see supplementary material).
Supplementary material is located at the QuartOP web page http://carrot.mcb.uconn.edu/quartets/.
To access the level of sequence conservation within the QuartOPs' sequences, we calculated the average percentage of pairwise identity per QuartOP.
To find parameters that will return consistent posterior probabilities within reasonable computation time, one QuartOP from mitochondrial genome quartet #m1 was analyzed multiple times with different parameters.
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