Words similar to quartet

Example sentences for: quartet

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Each of the aligned QuartOPs from a genome quartet was analyzed with respect to the posterior probability of the three possible tree topologies given the aligned QuartOP.
For the genome quartet #8 we calculated posterior probabilities under the model which takes ASRV into account with Strimmer and von Haeseler's [ 24 ] approach and with the MrBayes program version 2.01 [ 31 ] . TREE-PUZZLE 5.0 [ 56 ] was used to calculate posterior probabilities according to Strimmer and von Haeseler [ 24 ] . A discrete approximation of the gamma distribution [ 57 ] was used to describe ASRV.
To find parameters that will return consistent posterior probabilities within reasonable computation time, one QuartOP from mitochondrial genome quartet #m1 was analyzed multiple times with different parameters.
One noteworthy finding was that in the genome quartet including Synechocystis sp., Halobacterium sp., Aquifex aeolicus and Thermotoga maritima the grouping of
QuartOPs are similar to the clusters of orthologous groups (COGs) maintained by the NCBI [ 26 27 28 ] , but differ in that COGs require only unidirectional, circular best hit relationships for three of the reference genomes, whereas we require the reciprocal top hit relationship for the four genomes included in a quartet, and we do not limit our identification of QuartOPs to a number of reference genomes.