Words similar to pseudoobscura
Example sentences for: pseudoobscura
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These data show that predicted genes tend to have a higher rate of amino-acid substitution than known genes in the genus Drosophila . This trend is significant for the three most closely related pairwise comparisons ( D. melanogaster versus D. erecta, D. pseudoobscura or D. willistoni ) but non-significant in the comparison involving the most distantly related species ( D. melanogaster versus D. littoralis ). No significant differences were detected in the rates of silent site substitution between known and predicted genes in any pairwise comparison, although predicted genes in D. pseudoobscura, D. willistoni and
0), D. pseudoobscura (strain 14011-0121.
9% (105/133) for D. pseudoobscura ; 81.
miR-125 and miR-2c received exceptionally low scores in this analysis, while miR-10 was absent because it was not located in an alignable contig in the first available assembly of D. pseudoobscura (although it was identifiable by BLAST search).
We used the following genomic sequences and analyses in this work: D. melanogaster Release 3 sequence (Berkeley Drosophila Genome Project, BDGP) [ 36 ] ; D. melanogaster Release 3.1 annotation (BDGP) [ 40 ] ; D. pseudoobscura Release 1 sequence and assembly (Human Genome Sequencing Center at Baylor College of Medicine, HGSC at BCM) [ 37 ] ; whole-genome alignment of D. melanogaster and D. pseudoobscura (Berkeley Genome Pipeline) [ 32 ] ; Anopheles gambiae assembled genomic sequence (Anopheles Genome Project) [ 56 ] ; Apis mellifera unassembled genomic trace sequence (HGSC at BCM) [ 48 ] .
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