Words similar to phylogenomics
Example sentences for: phylogenomics
How can you use “phylogenomics” in a sentence? Here are some example sentences to help you improve your vocabulary:
However, a principle of phylogenomics is that orthologous sequences (that diverged by speciation) are more likely to conserve protein function than paralogous sequences (that diverged by gene duplication).
This approach was called "phylogenomics" by Eisen [ 9 ] . It would be desirable to automate this procedure, but the best automated methods for subfamily annotation, such as the COGs database [ 10 ] , are clustering methods that do not directly use phylogenetic analysis.
In order to get an estimate of the effectiveness of this implementation of automated phylogenomics, we used the RIO procedure to analyze the A. thaliana [ 16 ] and C. elegans [ 17 ] proteomes.
RIO is a procedure for automated phylogenomics.
One useful and automatable phylogenomics approach would be as follows: if a novel sequence has orthologs, annotation can be transferred from them (as in best BLAST analysis); if there are no orthologs, the sequence is classified as just a family member (as in Pfam/InterPro analysis) and flagged as possibly the first representative of a novel subfamily.