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Example sentences for: nodl

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Additional analyses of the putative nodL gene were conducted with Version 3.0b4 of the MrBayes software [ 56 ] . For these analyses, the Jones-Taylor-Thornton model of amino-acid replacement [ 57 ] was adopted and variation of replacement rates among sites was incorporated by a discretized gamma distribution with four rate categories [ 58 ] . Each Markov chain Monte Carlo analysis used four heated chains and employed a burn-in period of 10,000 cycles, followed by 990,000 additional cycles.
By contrast, R. radiobacter , which forms a parasitic relationship with plants by producing a crown gall rather than nodules, lacks these genes, and appears to possess only nodL , nodX and nodN , suggesting these three nod genes are sufficient to affect root growth and are involved in a parasitic lifestyle rather than being specific to symbiosis [ 33 ] .
Using polymerase chain reaction (PCR) primers designed from the Meloidogyne sequence we have attempted to amplify nodL from a range of nematode species.
To examine further the relationship between putative nodL candidates found in M. incognita and M. javanica with the cognate genes in rhizobia, we undertook a phylogenetic analysis and found that the two nematode genes fall squarely within the rhizobial nodL clade (Figure 2).
The alignment in Phylip format used to calculate the NodL tree