Words similar to mlst

Example sentences for: mlst

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However, not all biological sequences are composed of units that are functionally equally distinct from each other, as is the case of proteomic data and Multi-locus sequence typing [MLST, 4].
For over a decade the idea of representing biological sequences in a continuous coordinate space has maintained its appeal but not been fully realized [ 1 2 3 ] . The basic idea is that sequences of symbols, such as nucleotides in genomes, aminoacids in proteomes, repeated sequences in MLST [Multi Locus Sequence Typing, 4], words in languages or letters in words, would define trajectories in this continuous space conserving the statistical properties of the original sequences [ 3 5 6 7 8 9 ] . Accordingly, the coordinate position of each unit would uniquely encode for both its identity and its context, i.e. the identity of its neighbors [ 10 ] . Ideally, the position should be scale-independent, such that the extraction of the encompassing sequence can be performed with any resolution, leading to an oligomer of arbitrary length.