Words similar to misassemblies

Example sentences for: misassemblies

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Misassemblies were recognized by: regions of high quality unaligned sequence; multiple runs of poly(A) and/or poly(T) (at least 15 nucleotides with no more than a one non-A/T base); internal poly(A) and/or poly(T) runs (> 50 nucleotides from either end of a contig and ≥ 15 or more nucleotides long with no more than one non-A/T base; internal stretches of low consensus quality (> 30 nucleotides from either end of a contig and ≥ 50 nucleotides where 90% of the nucleotides had a consensus quality below Phred 20).
On 2R there are three misassemblies, mapping to 0.8 Mb, 14.
Release 3 sequence was used to characterize the content of the known and newly discovered gaps in Release 2. The sequence content was annotated as: transposable element; homopolymer; simple repeats; tandem repeats; misassemblies; unique; gross misassemblies; and unfilled for those gaps that remain in Release 3. Transposable elements were identified using a curated list described in [ 9].
All contigs with more than three member ESTs was screened for misassemblies using Consed tools and newly written scripts.
Misassemblies of tandem repeats account for only 5% of all gaps.