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Example sentences for: mged
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For information on the MGED ontologies please see [ 12].
Many of the authors of this paper have previously responded to this need by developing XML-based data-communication syntaxes for microarray experiments (GEML, gene expression markup language [ 3] from Rosetta Inpharmatics, and MAML, microarray markup language from MGED).
Recently MGED has published a specification describing MIAME, the minimal information for the annotation of a microarray experiment [ 1].
Other utility packages support requirements shared by the above components, specifically information on people and organizations, protocols used, simple annotations, free-text descriptions, and the ability to specify links to predefined ontologies such as those provided by MGED [ 2].
MIAME is based on the consensus of hundreds of participants in the MGED conferences (for more information see [ 2]) and specifies which data and contextual information should be supplied when a microarray gene-expression dataset is published.