Words similar to maximum-likelihood

Example sentences for: maximum-likelihood

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GENEHUNTER PLUS creates maximum-likelihood haplotypes when conducting multipoint linkage analysis.
Additionally, the maximum-likelihood haplotypes for each pedigree (generated by GENEHUNTER PLUS [ S4], a modified version of GENE-HUNTER [ S5]) were examined to identify multiple recombinants.
The maximum-likelihood mapping approach was further used to visualize support for each tree topology [ 24 ] , i.e. the posterior probability vector for each QuartOP was plotted into an equilateral triangle.
For all three possible unrooted tree topologies maximum-likelihood values and posterior probabilities were calculated using in-house JAVA programs that were written utilizing classes from the Phylogenetic Analysis Library version 1.0 [ 54 ] and parts of Vanilla package version 1.0 [ 54 ] . If not indicated otherwise, likelihood values were estimated using the automatically selected suitable substitution model (chosen from BLOSUM62, CPREV, Dayhoff, JTT, MTREV24, VT and WAG) with no ASRV.
Briefly, this process involved the construction of a least-squares tree using the FITCH program or a neighbor-joining tree using the NEIGHBOR program (both from the Phylip package) [ 48], followed by local rearrangement using the Protml program of the Molphy package [ 50] to arrive at the maximum-likelihood (ML) tree.