Words similar to maximum-likelihood
Example sentences for: maximum-likelihood
How can you use “maximum-likelihood” in a sentence? Here are some example sentences to help you improve your vocabulary:
Phylogenetic trees were constructed using neighbor-joining, least-squares and maximum-likelihood methods [ 44, 45].
A greater number of genes within a given family in Anopheles compared to Drosophila can be a result of gene expansion in Anopheles or, alternatively, gene loss in Drosophila . I considered the likelihood of either possibility for these cases, based on the trees that were constructed using neighbor-joining, parsimony, and maximum-likelihood algorithms.
The maximum-likelihood mapping approach was further used to visualize support for each tree topology [ 24 ] , i.e. the posterior probability vector for each QuartOP was plotted into an equilateral triangle.
The neighbor-joining (Figure 3a) and maximum-likelihood trees we constructed, in combination with the fact that mammalian KCNQ1 and Anopheles KCNQ2 gene products share a striking 75% identity (despite the divergence of protostomes and deuterostomes close to 700 million years ago), suggest that gene loss in Drosophila , specifically loss of an ancestral KCNQ2 (mammalian KCNQ1 ), is the cause of this difference, rather than gene expansion in Anopheles , which may be the case for the Kv3 and Irk3 (Figure 3b) gene families.
For all three possible unrooted tree topologies maximum-likelihood values and posterior probabilities were calculated using in-house JAVA programs that were written utilizing classes from the Phylogenetic Analysis Library version 1.0 [ 54 ] and parts of Vanilla package version 1.0 [ 54 ] . If not indicated otherwise, likelihood values were estimated using the automatically selected suitable substitution model (chosen from BLOSUM62, CPREV, Dayhoff, JTT, MTREV24, VT and WAG) with no ASRV.
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