Words similar to markov

Example sentences for: markov

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We use the Pfam protein family database [ 8 ] as a source of high quality curated multiple sequence alignments and profile HMMs (Hidden Markov Models, see [ 21 ] for a review), as well as programs from the HMMER package http://hmmer.wustl.edu/.
Posterior probabilities were also calculated with MrBayes version 2.01 [ 31 ] . Each QuartOP was analyzed with two simultaneous Markov chains for 25,000 cycles under the JTT substitution model [ 55 ] without ASRV.
Order zero Markov models ( WM0 12 for 12-RSS and WM0 23 for 23-RSS) assume that all RSS positions are independent and are therefore computed from marginal probability distributions.
Although the scores for these four RSS are higher under both Markov models than under the RIC 23 model, they are better discriminated by the RIC 23 model because the background scores are higher under the Markov models (Figure 7).
There is only the evaluation of pilot Markov chains to optimize jump size.