Words similar to macaw

Example sentences for: macaw

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Additionally, hidden Markov model based searches using a multiple alignment of known members were run using the HMMER2 package [ 36 ] . The Gibbs sampling procedure, as implemented in the MACAW program was used to detect and evaluate statistically significant conserved motifs [ 37 ] . Multiple alignments were constructed using the T_Coffee program [ 38 ] , followed by manual correction based on the PSI-BLAST results.
“A bird related to the macaw.”
Identification and statistical evaluation of conserved motifs in multiple protein sequences were performed using the Gibbs sampling method as implemented in the MACAW program [ 105 106 ] . Pattern searches were conducted using the GREF program of the SEALS package [ 107 ] , and pattern-initiated BLAST searches were carried out using the PHI-BLAST program [ 60 ] ?. Protein structure databases were searched for similar structures using the DALI program [ 108 ] . Protein secondary structure was predicted using the PHD program implemented on the PredictProtein server with a multiple alignment submitted as the [ 109 110 ] . Protein structures were visualized and manipulated using the Swiss-PDB viewer program [ 111 ] and the ribbon diagrams were made using MOLSCRIPT [ 112 ] .