Example sentences for: indel

How can you use “indel” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • Since our algorithms are based on searching for clusters of common sites, microsatellites can score high, but tend not to be functional (for an exception see [ 9 ] ). We used the Tandem Repeat Remover [ 17 ] to mask microsatellites, with scoring parameters (2 5 5 75 20 20 500) (respectively; match, mismatch, indel scores; percentage priors for mismatch and indels; minimum score, and maximum length) which are as promiscuous as possible yet did not detect appreciable microsatellites in random sequences.

  • Of these, one is unique to Ps-moeZ ; four are shared with members of the mycobacteria clade; and none are shared with members of the cyanobacteria clade or Mlo-moeZdR . Thus the results of the indel analysis supported the position of Ps-moeZ in the ThiF domain tree.

  • Protein alignments were generated using the Clustal X program and checked manually [ 40 ] . SSU NA sequences were aligned using Clustal W as implemented by the OMIGA package and checked manually [ 41 42 ] . NA alignments of full-length moeZ sequences for indel analysis were aligned manually based on the Clustal X protein sequence alignment.

  • Complete information on all of our Screening Sets is freely available from the Marshfield web site http://research.marshfieldclinic.org/geneticsalong with lists of over 200,000 candidate and confirmed human indel polymorphisms, both multi- and diallelic.

  • The results of the indel analysis also suggest that Ps-moeZ is more closely related to the mycobacteria moeZ sequences than to the cyanobacteria and proteobacteria moeZ sequences.


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